Here is the full list of all 32 System Protocol One achievements.
A single Sudo Kill Command destroys 50 viruses.
Destroy 50 viruses with a single, fully charged Compressor strike.
Play through the tutorial.
Manually advance ever wave in a server and successfully defend it.
Find and activate all switches.
Fire 10 million multiplexer lasers.
Have two adjacent Compressors trigger at the same instant.
Kill a total of 500 Code Injector infected viruses with Compressor blasts.
Kill a total of 500 Code Injector infected viruses with Honeypots.
Kill 250 Background Viruses with Ping Cannons.
Destroy 5000 stock viruses.
Destroy 5000 adaptive viruses.
Destroy 5000 background viruses.
Destroy 5000 refurb viruses.
Stun boss viruses 250 times.
Destroy 5000 hardened viruses.
An adaptive virus boss reaches a DataCore with less than 1% of its health.
Successfully defend a server without building any Ping Cannons or Multiplexers.
Successfully defend a server using only Walls and Firewalls.
Manually advance every wave in a server and successfully defend it, while playing on Frumious difficulty.
Kill more than 500 viruses in a server with Pyramid Antivirus™ nodes.
Build at least one of every structure on a server (and win).
Beat 15 levels on Easy.
Beat 15 levels on Normal.
Beat every level on Frumious.
Build a Honeypot that grows to 50 damage per second.
Beat the About level.
Get a top 10 score.
Get a #1 score.
Beat Guacamole on Frumious.
Beat Stream Lattice on Frumious.
Destroy 5000 overclocked viruses.